鲤疱疹病毒Ⅱ型套式PCR检测方法的建立
Establishment of nested PCR method for detection of Cyprinid herpesvirus 2
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摘要: 为了快速准确检测引发鲫造血器官坏死病的鲤疱疹病毒Ⅱ型(CyHV-2),试验根据GenBank中发表的CyHV-2解旋酶基因序列设计2对特异性引物,对PCR退火温度进行优化,建立了CyHV-2套式PCR检测方法,对引物的特异性和敏感性进行检验,并利用该方法对138份鲫鱼临床样品进行了检测。结果表明:试验建立的套式PCR检测方法第1轮和第2轮的最佳退火温度分别为55℃和59℃;该方法能特异性地扩增出515 bp和277 bp的CyHV-2解旋酶基因片段,且对草鱼呼肠孤病毒(GCRV)、鲤春病毒血症病毒(SVCV)、对虾白斑病毒(WSSV)、对虾传染性皮下及造血组织坏死病毒(IHHNV)和虾虹彩病毒(SHIV)均不能扩增出任何片段;对CyHV-2的检测灵敏度为常规PCR方法的100~1 000倍;临床样品检测结果显示符合率为100%。说明建立的套式PCR方法具有极高的特异性和灵敏性,可用于CyHV-2急性感染和隐性感染的早期诊断。Abstract: In order to quickly and accurately detect Cyprinid herpesvirus 2(CyHV-2) that causes the Crucian carp hematopoietic necrosis, two pairs of specific primers were designed according to the published CyHV-2 helicase gene sequence in GenBank. A nested PCR method for detecting CyHV-2 was established by optimizing the PCR annealing temperature. The specificity and sensitivity of the primers were tested, and 138 clinical samples of crucian carp were detected by using this method.The results showed that the optimal annealing temperatures for the first and second rounds of the nested PCR detection were 55 ℃ and 59 ℃ respectively. CyHV-2 helicase gene fragments of 515 bp and 277 bp could be amplified by this method, and could not be amplified for grass carp reovirus(GCRV), cyprinus spring viremia virus(SVCV), shrimp white spot virus(WSSV), shrimp infectious subcutanized and hematopoietic tissue necrosis virus(IHHNV) and shrimp iridium virus(SHIV). The detection sensitivity of CyHV-2 was 100~1 000 times than that of conventional PCR method. The clinical sample test results showed that the coincidence rate was 100%. The results indicated that the nested PCR method was highly specific and sensitive, and could be used for the early diagnosis of acute and latent infections of CyHV-2.