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基于TMT技术的香芹酚和丁香酚杀螨机制分析

Analysis of acaricidal mechanism of carvacrol and eugenol based on TMT technology

  • 摘要: 为了探究香芹酚和丁香酚的杀螨机制,试验首先设置香芹酚组、丁香酚组和阴性对照组共3组,每组3个重复,香芹酚组、丁香酚组和阴性对照组分别用0.15%丁香酚、0.05%香芹酚和液体石蜡处理疥螨4 h后提取疥螨蛋白质,蛋白质经还原烷基化、酶解及串联质谱标记(tandem mass tag, TMT)后进行高效液相色谱分离和液相色谱串联质谱分析;然后对香芹酚组/阴性对照组及丁香酚组/阴性对照组的差异表达蛋白进行分析,并对差异表达蛋白进行GO功能富集分析和KEGG信号通路富集分析;最后筛选与香芹酚、丁香酚杀螨相关的差异表达蛋白。结果表明:香芹酚组/阴性对照组共有蛋白4 692个,其中差异表达蛋白235个(上调蛋白113个,下调蛋白122个);丁香酚组/阴性对照组共有蛋白4 824个,其中差异表达蛋白103个(上调蛋白43个,下调蛋白60个)。香芹酚组/阴性对照组差异表达蛋白极显著富集(P<0.01)的GO二级条目包括平滑信号通路、从细胞核输出的蛋白质调节、氧化磷酸化等;显著富集(P<0.05)的GO二级条目包括核质转运的调节、细胞内蛋白质运输的调节、甘油酯生物合成过程等。丁香酚组/阴性对照组差异表达蛋白极显著富集(P<0.01)的GO二级条目包括tRNA修饰、ncRNA处理;显著富集(P<0.05)的GO二级条目包括细胞酰胺代谢过程、正向调节蛋白定位到细胞核、含蝶啶化合物分解代谢过程等。香芹酚组/阴性对照组差异表达蛋白显著富集(P<0.05)的KEGG信号通路包括α-亚麻酸代谢、卟啉与叶绿素代谢、癌症蛋白聚糖等。丁香酚组/阴性对照组差异表达蛋白显著富集(P<0.05)的KEGG信号通路包括核糖体、军团杆菌病。与香芹酚杀螨机制相关的GO二级条目为氧化磷酸化,磷脂酰甘油磷酸合成酶和细胞色素C氧化酶亚基1注释到这一过程中;与阴性对照组比较,香芹酚组的磷脂酰甘油磷酸合成酶显著上调(P<0.05),细胞色素C氧化酶亚基1显著下调(P<0.05)。与丁香酚杀螨机制相关的KEGG信号通路为核糖体,核糖体L23蛋白60S亚基、核糖体L32蛋白39S亚基、核糖体L3蛋白39S亚基、核糖体S16蛋白28S亚基、核糖体L1蛋白39S亚基注释到这一KEGG信号通路中;与阴性对照组比较,丁香酚组的上述蛋白均显著下调(P<0.05)。说明香芹酚杀螨机制与氧化磷酸化这一过程相关,丁香酚杀螨机制与核糖体蛋白表达相关。

     

    Abstract: In order to investigate the acaricidal mechanism of carvacrol and eugenol, in the experiment, firstly, three groups of carvacrol, eugenol and negative control groups were set up with three replicates in each group. Scabies mites were treated with 0.15% eugenol, 0.05% carvacrol and liquid paraffin in the carvacrol, eugenol and negative control groups, respectively, and after 4 h, scabies mite proteins were extracted. The proteins were separated by high performance liquid chromatography(HPLC) and analyzed by liquid chromatography tandem mass spectrometry(LC-MS/MS) after reductive alkylation, enzymatic digestion and tandem mass tagging(TMT). Then the differentially expressed proteins in the carvacrol group/negative control group and the eugenol group/negative control group were analyzed, and the differentially expressed proteins were subjected to GO functional enrichment analysis and KEGG signaling pathway enrichment analysis. Finally, the differentially expressed proteins were screened for their relevance to the acaricidal effect of carvacrol and eugenol. The results showed that there were 4 692 proteins in the carvacrol group/the negative control group, of which 235 proteins were differentially expressed(113 up-regulated proteins and 122 down-regulated proteins); there were 4 824 proteins in the eugenol group/the negative control group, of which 103 proteins were differentially expressed(43 up-regulated proteins and 60 down-regulated proteins). The GO secondary entries of differentially expressed proteins in the carvacrol group/negative control group that were highly significantly enriched(P<0.01) included smooth signaling pathway, regulation of protein export from the nucleus, and oxidative phosphorylation, etc.; and the GO secondary entries that were significantly enriched(P<0.05) included the regulation of nucleoplasmic transfer, the regulation of intracellular protein transport, and glycrerolipid biosynthetic process. The GO secondary entries of differentially expressed proteins in the eugenol group/negative control group that were highly significantly enriched(P<0.01) included tRNA modification, ncRNA processing; the GO secondary entries that were significantly enriched(P<0.05) included cytosolic amide metabolic processes, positive regulation of protein localization to nucleus, and pteridine-containing compound catabolic process. KEGG signaling pathways that were significantly enriched(P<0.05) for differentially expressed proteins in the carvacrol group/negative control group included alpha-linolenic acid metabolism, porphyrin and chlorophyll metabolism, and proteoglycan in cancer. KEGG signaling pathways significantly enriched(P<0.05) in differentially expressed proteins in the eugenol group/negative control group included ribosomes, and Legionella disease. The GO secondary entry related to the mechanism of carvacrol killing mites was oxidative phosphorylation, in which phosphatidylglycerol phosphate synthetase and cytochromic C oxidase subunit 1 were annotated. Compared with negative control group, the phosphatidylglycerol phosphate synthetase in carvacrol group was significantly up-regulated(P<0.05), and the cytochrome C oxidase subunit 1 was significantly down-regulated(P<0.05). The KEGG signaling pathway related to the mechanism of eugenol killing acaroid was ribosome. The 60S subunit of ribosome L23 protein, 39S subunit of ribosome L32 protein, 39S subunit of ribosome L3 protein, 28S subunit of ribosome S16 protein and 39S subunit of ribosome L1 protein were annotated in this KEGG signaling pathway. Compared with negative control group, the above proteins in eugenol group were significantly down-regulated(P<0.05).The results suggested that the acaricidal mechanism of carvacrol might be related to the process of oxidative phosphorylation, and the acaricidal mechanism of eugenol might be related to the expression of ribosomal proteins.

     

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