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红平红球菌KB1 Resuscitation-promoting factor促进污染土壤细菌石油降解性能及可培养细菌多样性

Promoting on the Degradation Efficiency and Diversities of the Oil Contaminated Soil Bacteria by the Recombinant Resuscitationpromoting Factor From Rhodococcus erythropolis KB1

  • 摘要: 复苏促进因子(resuscitation-promoting factor, Rpf)是一类参与休眠细胞复苏和细菌生长的细胞因子。将重组红平红球菌(Rhodococcus erythropolis) KB1复苏促进因子与石油污染土壤添加到含原油的细菌富集培养基,观察Rpf对污染土壤土著微生物的原油降解能力及富集可培养细菌多样性的影响。发现添加不同浓度Rpf实验组的石油降解率从30.42%分别提高到36.51%和37.93%。Rpf添加能明显提高富集的可培养石油降解菌类群多样性。对照组富集土壤可培养石油降解菌类群主要有9个门,其中变形菌门(Proteobacteria)为最优势菌门,丰度为94.55%,在属水平上包含82个不同的细菌属,其优势菌属为不动杆菌属(Acinetobacter)、假黄单胞菌属(Pseudoxanthomonas)和无色杆菌属(Achromobacter),丰度分别为55.32%,6.94%和6.32%。添加重组Rpf的实验组可培养细菌分别增加到13个门和16个门,变形菌门是最优势菌门,丰度分别为92.64%和95.21%,但富集细菌的多样性增加,细菌属分别增加到99属和122属,实验组的不动杆菌属分别下降为24.96%和33.25%,寡养单胞菌属(Stenotrophomonas)由1.85%增加到23.20%和32.26%,苍白杆菌属(Ochrobactrum)由0.94%增加到6.97%和1.15%。用涂布平板法从添加Rpf实验组污染土壤中分离到6株石油降解细菌。本研究明确了Rpf蛋白对土壤石油降解菌多样性的影响,并分离获得高效石油降解菌,为石油污染土壤的生物修复提供了新的方法和思路。

     

    Abstract: Resuscitation-promoting factor(Rpf) is a type of cytokine involved in the resuscitation of dormant cells and bacterial growth. Rhodococcus erythropolis KB1 Rpf and petroleum-contaminated soil were added to the bacterial enrichment medium containing crude oil to observe the effect of Rpf on the crude oil degradation ability and enrichment of culturable bacterial diversity of indigenous microorganisms in contaminated soil. The oil degradation rates in the groups with different recombinant Rpf were increased from 30.42% to 36.51% and 37.93%, respectively. The recombinant Rpf also increased the diversities of the cultivable oil-degrading bacteria. In the control group without Rpf, nine bacterial phyla were determined. Proteobacteria was the dominant bacterial phylum, with a relative abundance of 94.55%. 82 bacterial genera were founded. The dominant bacterial genera were Acinetobacter, Pseudoxanthomonas and Achromobacter, with relative abundances of 55.32%, 6.94% and 6.32%. In the groups with recombinant Rpf, the bacterial phyla were increased to 13 and 16 respectively. The Proteobacteria was the dominant bacterial phylum, with the relative abundances of 92.64% and 95.21%. And in the groups containing the recombinant protein 99 and 122 bacterial genera were founded. The abundances of Acinetobacter were decreased to 24.96% and 33.25%, but abundances of Stenotrophomonas increased from 1.85% to 23.20% and 32.26%. Abundances of Ochrobactrum increased from 0.94% to 6.97% and 1.15% respectively. Six oil degrading bacteria were isolated from the oil contaminated soils in the groups containing the recombinant Rpf. In this study, we clarified the effect of Rpf protein on the diversity of soil petroleum-degrading bacteria and isolated efficient petroleum-degrading bacteria, which provided a new method and idea for the bioremediation of petroleum-contaminated soils.

     

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