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草鱼phd基因分子克隆、序列分析及杜仲对其表达的影响

Molecular Cloning and Sequence Analysis of phd and Dietary Effect of Eucommia ulmoides on Its Expression of Grass Carp (Ctenopharyngodon idella)

  • 摘要: 脯氨酸羟化酶(prolyl hydroxylase, PHD)是胶原合成的关键酶,在维持胶原三螺旋结构稳定性中起着重要作用。为探究草鱼phd基因在草鱼不同组织中的表达水平及其在胶原合成方面的作用,本实验通过RACE技术获得phd 2 175 bp cDNA全序列,包含1 074 bp开放阅读框,编码358个氨基酸,168 bp的5′-末端非翻译区和933 bp的3′-末端非翻译区。PHD蛋白分子质量为39.773 kDa,无信号肽,无跨膜区,为亲水性蛋白质。同源性比对发现,草鱼PHD氨基酸序列与其他鱼类PHD氨基酸同源性较高,尤其与团头鲂的相似性高达95.17%,进化分析结果也显示草鱼与团头鲂的亲缘关系最近,与人、老鼠、牛的亲缘关系最远。组织表达水平结果显示,phd在草鱼前肠中表达量最高,其次是在脑、肾、血、心脏,在肝、鳃、肌肉、皮肤中也有一定的表达量,而在脾脏中表达量最低。饲料中添加2%杜仲,能显著促进第4、8周时草鱼phd在草鱼肌肉、皮肤、心脏、前肠等组织中的表达。本研究结果可为进一步研究脯氨酸羟化酶在鱼类胶原蛋白形成过程中的作用提供科学依据。

     

    Abstract: Prolyl hydroxylase(PHD) is a key enzyme in collagen synthesis, involved in the triple helix structure stability of collagen. In order to explore the expression of phd in different tissues of grass carp(Ctenopharyngodon idella) and its role in collagen synthesis, the full length 2 175 bp cDNA sequence of grass carp phd gene was obtained by the PCR amplification and RACE method, including a 168 bp 5′-end untranslated region, a 933 bp 3′-end untranslated region and a 1 074 bp open reading frame encoding 358 amino acids. The molecular weight of PHD protein is 39.773 kDa, and it is a hydrophilic protein without signal peptide and transmembrane region. Compared with BLAST alignment on NCBI, the amino acid sequence of grass carp PHD has a high homology with other fishes, moreover, the identity with Megalobrama amblycephala is 95.17%. The evolutionary analysis showed that PHD from grass carp had the closest relationship with that from Megalobrama amblycephala, and the furthest relationship with that from humans, mice and cattle. Tissue differential expression analysis showed that phd gene had the highest expression in the foregut, then in the brain, kidney, blood, heart, liver, gills, muscle, skin, and the lowest expression was observed in the spleen. When grass carp were fed diet containing 2% Eucommia ulmoides for 4 weeks and 8 weeks, the expression of phd was significantly promoted in the muscle, skin, heart and foregut. The present results can provide a scientific basis for studying the acting mechanism of prolyl hydroxylase in collagen formation of fishes.

     

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