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维氏气单胞菌asfR基因敲除菌株的构建及功能初探

Construction and Functional Identification of asfR Knockout Strain of Aeromonas veronii

  • 摘要: 维氏气单胞菌(Aeromonas veronii)是一种革兰氏阴性致病菌,能引发水产动物和人类的多种疾病,对水产养殖业和人类公共健康造成严重威胁,但其致病机制尚不明确。维氏气单胞菌C4菌株基因组分析发现,与细菌Ⅲ型分泌系统有关的鞭毛合成基因fliE的相邻位置存在1个功能未知的AraC家族转录因子编码基因,我们将其命名为asfR。NCBI CD-Search预测结果显示,AsfR蛋白含有一个保守的HTH DNA结合功能域,以及1个类似GyrI的小分子结合功能域。已知AraC蛋白超家族广泛存在于细菌中,参与碳代谢、应激反应、细菌毒力和致病性的多种生命活动的调节。asfR基因在维氏气单胞菌AVNIH1和TH0426菌株中高度保守,但对其生物学功能的研究尚未见报道。为进一步探究该蛋白的功能,本研究采用同源重组手段构建asfR基因敲除菌株,并与野生型菌株进行初步比较,发现asfR基因敲除不影响致病菌在富营养条件下的生长能力,但能显著提高其在逆境下的生长能力,而且其生物膜形成能力减弱。上述结果表明,AsfR参与维氏气单胞菌生物膜形成以及逆境抵抗。本研究为进一步鉴定该蛋白的生物学功能提供了必要的研究工具和初步的理论基础。

     

    Abstract: Aeromonas veronii, a gram-negative pathogenic bacterium, causes a variety of diseases in aquatic animals and human, which poses a severe threat to the aquaculture industry and human public health but the pathogenesis mechanism is not clear. The genomic analysis of A.veronii C4 revealed the existence of the gene encoding an unknown AraC family transcription factor, named as asfR by us, located at the adjacent site of the flagellum synthesis gene fliE that is related to the type Ⅲ secretion system of bacteria. Prediction by NCBI CD-Search indicated that AsfR contained a conserved HTH DNA binding domain and a GyrI-like small molecule binding domain. The AraC protein superfamily is known to be ubiquitous in bacteria and is involved in the regulation of various cellular processes, including carbon metabolism, stress responses, bacterial virulence and pathogenicity. AsfR is highly conserved in AVNIH1 and TH0426 strains of A. veronii, but further studies on the biological functions of this protein have not been reported yet. In order to further study the function of the protein, homologous recombination technology was used to construct asfR gene-knockout strains in this study. We also found that asfR deletion did not affect the growth of the bacteria under nutrient-rich circumstance, but significantly increased growth rate under the adversity condition, compared with wild-type strain. Moreover, the abilities of biofilm formation decreased in asfR deletion strain. The results demonstrated that AsfR was involved in the biofilm formation and stress resistance of A. veronii. This study provides a necessary tool and the primary theoretical basis for the further identification of the biological functions of the protein AsfR in A.veronii C4.

     

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