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枣SWEET基因家族的全基因组鉴定及表达分析

Genome-wide Identification and Expression Analysis of the SWEET Gene Family in Ziziphus jujuba

  • 摘要: SWEET (sugars will eventually be exported transporter)是一类著名的糖类运输体,在植物的生长发育、果实成熟、糖类运输和胁迫反应中发挥重要作用。本研究在枣(Ziziphus jujuba)中鉴定了27个SWEET基因,并对它们的保守基序、基因结构、染色体定位、进化关系、启动子顺式作用元件等进行分析,对亚细胞定位进行预测。结果表明,ZjSWEET基因家族成员不均匀地分布在11条染色体上,均具有1~2个MtN3保守结构域,含多个内含子。根据系统进化关系,27个ZjSWEET成员可分为3个分支,同一分支具有相似的基因结构和基序。ZjSWEET基因启动子区域包含激素、胁迫等多个逆境相关的顺式元件。转录组数据分析表明,基因ZjSWEET9、ZjSWEET22和ZjSWEET23可能参与枣果实中蔗糖积累的调控,ZjSWEET22、ZjSWEET23和ZjSWEET25可能参与对高温胁迫的调控。总之,ZjSWEET在果实发育过程及高温胁迫中扮演着重要的角色,这些结果有助于更好地理解SWEET基因,从而为进一步探索枣SWEET基因功能提供参考。

     

    Abstract: SWEET(sugars will eventually be exported transporter) is a well-known class of sugar transporters that play important roles in plant growth and development, fruit ripening, sugar transport and stress response. In this study, 27 SWEET genes were identified from jujube(Ziziphus jujuba), and their conserved motifs, gene structure, chromosomal location, evolutionary relationships, promoter cis-acting elements were analysed, and the subcellular localization was predicted. The results showed that the ZjSWEET gene family members had 1~2 MtN3 conserved structural domains and contained multiple introns, unevenly distributed on 11 chromosomes. Based on phylogenetic relationships, the 27 ZjSWEET members can be divided into three branches, with the same branch having similar gene structure and motifs. The promoter region of the ZjSWEET genes contains multiple stress-related cis-elements such as hormones and stresses. Analysis of transcriptome data indicated that genes ZjSWEET9, ZjSWEET22 and ZjSWEET23 may be involved in the regulation of sucrose accumulation in date fruits and ZjSWEET22, ZjSWEET23 and ZjSWEET25 may be involved in the regulation of high temperature stress. In conclusion, ZjSWEET plays an important role in fruit development process and high temperature stress, and these results help to better understand SWEET genes, thus providing a reference for further exploration of date SWEET gene functions.

     

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