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薰衣草DXS基因家族的全基因组鉴定和表达分析

Genome-wide Identification and Expression Analysis of DXS Gene Family in Lavandula angustifolia

  • 摘要: 脱氧-D-木酮糖-5-磷酸合成酶(1-deoxy-D-xylulose-5-phosphate synthase, DXS)是植物萜类生物合成甲基苏糖醇磷酸(methylerythritol phosphate, MEP)途径的第一个关键酶,在薰衣草(Lavandula angustifolia)萜类物质的生物合成中起重要作用。本研究中,通过薰衣草全基因组序列分析发现了DXS家族(命名为LaDXS)的22个成员,处于4个进化分支中。多数LaDXS是以α-螺旋和无规则卷曲为主的稳定性蛋白,其氨基酸数量在143~848,分子量为15.6~91.4 kDa,没有明显的信号肽和跨膜结构域,其中72%的成员定位于叶绿体。基因表达分析结果显示LaDXS在薰衣草不同组织中具有差异表达,La23G00913和La07G01277在除花瓣以外的各组织中的表达量显著;La11G00786、La17G01254和La22G01334在花蕾及花萼中的表达量最高,这可能与薰衣草精油中萜类合成密切相关。启动子分析结果显示它们受光强度、茉莉酸甲酯以及脱落酸等多种因素调节。RT-qPCR分析确认La11G00786、La02G02002、La03G00622和La23G00913在花蕾中的表达显著被光诱导。本研究结果为进一步研究LaDXS家族基因在薰衣草萜类物质合成中的作用奠定基础。

     

    Abstract: In plants, 1-deoxy-D-xylulose 5-phosphate synthase(DXS) is the first key enzymes in the methy-lerythritol phosphate(MEP) pathway, and plays an important role in the pathways of terpenoid biosynthesis in lavender(Lavandula angustifolia). In this study, 22 DXS family members in four clades, named LaDXS, were identified in the lavender genome via genome sequence analysis. Most LaDXS were stable proteins dominated by α-helix and random coil, and contained 143~848 amino acids with a molecular weight of 15.6~91.4 kDa. They had no transmembrane domain and signal peptide. Most LaDXS proteins(72%) were localized in chloroplasts. Gene expression analysis showed level difference of LaDXS in tissues of lavender. La23G00913 and La07G01277 were significantly expressed in all tissues except petals, while La11G00786, La17G01254 and La22G01334 had the highest expression in flower bud and calyx, which might be closely related to synthesis of terpenes in lavender essential oil. Promoter analysis revealed that LaDXS gene may be regulated by many factors including light intensity, methyl jasmonate, and abscisic acid, etc. RT-qPCR analysis confirmed that expression of La11G00786, La02G02002, La03G00622, and La23G00913 in flower buds was significantly induced by light. These results will be helpful to further study on the role of LaDXS family genes in the synthesis of lavender terpenoids.

     

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