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白桦雄花序发育早期和中期差异表达基因的cDNA-AFLP分析

cDNA-AFLP Analysis of Differentially Expressed Transcripts in Early and Middle Development Stages of Male Inflorescence in White Birch(Betula platyphylla Suk.)

  • 摘要: 白桦雄花发育周期较长,从出现雄花序至花粉成熟经历近一年,其发育早期和中期是决定雄配子体发育的重要时期。采用cDNA-AFLP方法对白桦早期和中期发育雄花序进行了差异表达谱分析,共得到了62个TDFs,其中30个TDFs与Genbank 中的基因具有较高的同源性,其它32个是未知序列。GO分析结果显示,这些已知基因主要参与代谢过程、细胞过程、刺激应答、生殖、信号传导和生物调控等生物学过程,其分子功能主要涉及催化活性、结合分子功能、酶调节活性和转运活性等;发现了参与生殖和雄花发育的两个重要TDFs,Bplbs658和Bplbs199。另外,选择11个TDFs进行不同组织的qRT-PCR转录表达分析,结果表明这些基因不仅参与花发育,也参与营养组织的发育,但各自具有不同的组织表达特征。

     

    Abstract: The reproductive development of male inflorescence for Betula platyphylla takes almost a whole year from the emergence of original male inflorescence to the formation of mature pollen. The early and middle development periods are much essential for the development of male gametophyte of B. platyphylla. The differentially expressed transcripts in early and middle developmental stages were analyzed by cDNA-Amplified Fragment Length Polymorphism (cDNA-AFLP) technique. Among 62 successfully sequenced fragments, 30 showed significant homologies to known genes in Genbank, while the other 32 were supposed to unknown and new sequences. GO annotation showed that these known genes were involved in the processes of metabolic process, cellular process, response to stimulus, reproduction, signal transduction, and biological regulation, and then with the molecular function of catalytic activity, binding molecular, enzyme regulator activity and transporter activity. Two important TDFs involved in reproduction and male inflorescence development of B. platyphylla were found, named as Bplbs658 and Bplbs199. In addition, the transcript expression of 11 TDFs were examined in different tissues by qRT-PCR. The results indicated that these genes were involved in the development of both floral tissues and vegetative tissues of B. platyphylla with distinct tissue-specific expression patterns.

     

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