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辣椒TIFY基因家族的鉴定与分析

Identification and Analysis of TIFY Gene Family in Pepper

  • 摘要: TIFY基因家族是植物特有的转录因子家族,利用生物信息学共鉴定了15个辣椒TIFY基因,其氨基酸数量在153~411个之间,分布于8条染色体上,所有CaTIFYs定位于细胞核中,进化关系分析表明CaTIFY可聚类为8个组,辣椒TIFYs与番茄TIFYs的亲缘关系最近。叶片和花发育中CaTIFY2、CaTIFY3、CaTIFY4、CaTIFY11基因的表达量较高,果皮和胎座发育中CaTIFY2、CaTIFY3、CaTIFY4、CaTIFY7、CaTIFY11、CaTIFY12基因的相对表达量较高,种子发育过程中CaTIFY2、CaTIFY4、CaTIFY11、CaTIFY12有较高的表达量。CaTIFYs基因启动子含有多种激素和非生物胁迫响应元件,转录组数据分析显示,在非生物胁迫和激素处理后根系中CaTIFY4、CaTIFY9、CaTIFY11、CaTIFY14基因的表达量明显上调,而叶片中CaTIFY9的表达量明显下调。

     

    Abstract: TIFY gene family is a family of transcription factors unique to plants. Fifteen pepper TIFY genes were identified by bioinformatics, of which the number of amino acids ranged from 153 to 411, which were distributed on 8 chromosomes and all CaTIFYs were located in the nucleus. The analysis of evolutionary relationship showed that CaTIFY could be clustered into 8 groups, and pepper TIFYs had the closest genetic relationship with tomato TIFYs. The expression of CaTIFY2,CaTIFY3,CaTIFY4,CaTIFY11 was higher in leaf and flower development. The relative expression of CaTIFY2,CaTIFY3,CaTIFY4,CaTIFY7,CaTIFY11,CaTIFY12 gene was high during the development of pericarp and placenta. The expression of CaTIFY2,CaTIFY4,CaTIFY11,CaTIFY12 was high during seed development. The CaTIFYs gene promoter contained a variety of hormones and abiotic stress response elements. Analysis of transcriptome data showed that the expression of CaTIFY4,CaTIFY9,CaTIFY11,CaTIFY14 gene in roots significantly increased after abiotic stress and hormone treatment, while the expression of CaTIFY9 in leaves significantly decreased.

     

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