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甜菜谷胱甘肽S-转移酶基因家族鉴定及在镉胁迫下的响应分析

Identification of Glutathione S-transferase Gene Family in Sugar Beet and the Response to Cadmium Stress

  • 摘要: 为了研究谷胱甘肽S-转移酶基因(GST)家族在甜菜(Beta vulgaris)中对其生长发育及受到非生物胁迫时的潜在功能,以甜菜BvGSTs家族为研究对象,对其理化性质、进化关系、顺式作用元件、染色体定位及在镉胁迫下的转录表达特性进行深入地分析。结果表明:甜菜基因组中共有52个BvGSTs基因家族成员,分布于7个亚家族中;它们的相对分子质量在17~28 kDa,理论等电点pI在5.16~6.77,大部分成员定位于细胞质。BvGSTs结构中共发现9个motif,其中motif 8为Phi亚家族所特有。30个BvGSTs分别位于8条甜菜染色体,存在4处串联重复。根据顺式作用元件分析,甜菜BvGSTs可参与多种生物与非生物胁迫响应。转录组学分析发现全部52个BvGSTs均不同程度的参与到甜菜对镉胁迫的应答过程。其中在地下部,大多数Tau亚家族成员的表达受到镉胁迫的正向调控;在地上部,Phi亚家族受镉胁迫的显著诱导,Tau亚家族的表达被抑制。qRT-PCR分析表明,4个差异表达显著的BvGSTs的转录受到了镉胁迫调控,并与转录组测序结果相符。上述结果为进一步对甜菜谷胱甘肽S-转移酶在镉胁迫过程中的生物学功能的研究奠定基础。

     

    Abstract: To clarify the potential function of Glutathione-S-transferase gene(GST)family in sugar beet(Beta vulgaris)growth and development and abiotic stress,the sugar beet Bv GSTs was identified,and the physical and chemical properties,evolutionary relationship,homeopathic elements,chromosome location and transcriptional expression characteristics under cadmium stress were comprehensively analyzed,respectively.The results showed that there were 52 members of Bv GSTs in sugar beet genome,which were distributed in seven subfamilies;The molecular weight of the members ranged from 17-28 k Da,and the theoretical isoelectric point(p I)was between 5.16-6.77,and most of the members were located in cytoplasm.There were nine motifs found in Bv GSTs,among which motif eight was unique to Phi subfamily.Among all the members,30Bv GSTs were distributed in eight chromosomes respectively,with four tandem repeats.According to cis-acting element analysis,Bv GSTs might be involved in a variety of biotic and abiotic stress responses.Transcriptome analysis showed that all of 52 Bv GSTs were related to response of sugar beet to cadmium stress.The expression of most members of Tau subfamily under ground parts was positively regulated by cadmium stress;Phi subfamily above ground parts was significantly induced by cadmium stress,and the expression of Tau family was inhibited.The result of q RT-PCR showed that the transcripts of the four differentially expressed Bv GSTs were regulated by cadmium stress,which was consistent with the results of transcriptome sequencing.These results would play a foundamental role in further study on the biological function of sugar beet glutathione S-transferase under cadmium stress.

     

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